selected publications
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academic article
- Appearance and disappearance rates of Phanerozoic marine animal paleocommunities. Geology. 50:341-345. 2022
- Data-Driven Discovery in Mineralogy: Recent Advances in Data Resources, Analysis, and Visualization. Engineering. 5:397-405. 2019
- Using Visual Exploratory Data Analysis to Facilitate Collaboration and Hypothesis Generation in Cross-Disciplinary Research. ISPRS International Journal of Geo-information. 6.0. 2017
- Weaving a knowledge network for Deep Carbon Science. Frontiers in Earth Science. 5. 2017
- Semantic specification of data types for a world of Open Data. ISPRS International Journal of Geo-information. 5. 2016
- SEM+: Tool for discovering concept mapping in Earth science related domain. Earth Science Informatics. 8:95-102. 2015
- Strengthening an Interagency Network for Geoscience Data Sets: Report of Geodata 2014 Workshop. Eos, Transactions, American Geophysical Union. 95:411-411. 2014
- Ontology dynamics in a data life cycle: challenges and recommendations from a geoscience perspective. Journal of Earth Science. 25:407-412. 2014
- A jigsaw puzzle layer cake of spatial data. Eos, Transactions, American Geophysical Union. 95:161-161. 2014
- Capturing provenance of global change information. Nature Climate Change. 4:409-413. 2014
- Ontology engineering in provenance enablement for the National Climate Assessment. Environmental Modelling and Software. 61:191-205. 2014
- Provenance representation for the National Climate Assessment in the Global Change Information System. IEEE Transactions On Geoscience and Remote Sensing. 51:5160-5168. 2013
- Recent progress on geologic time ontologies and considerations for future works. Earth Science Informatics. 6:31-46. 2013
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article
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chapter
- Documenting Provenance for Reproducible Marine Ecosystem Assessment in Open Science. Oceanographic and Marine Cross Domain Data Management for Sustainable Development. Ed. Diviacco, Paolo. Hershey, PA, USA: IGI Global. 100-126. 2017
- Data visualization in the Semantic Web. The Semantic Web in Earth and Space Science: Current Status and Future Directions. Ed. Fox, Peter A. Berlin: IOS Press. 149-167. 2015
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conference paper
- From data portal to knowledge portal: Leveraging semantic technologies to support interdisciplinary studies. Proceedings of the Diversity++ Workshop at ISWC. 2015
- Language and Domain Independent Entity Linking with Quantified Collective Validation. Conference on Empirical Methods in Natural Language Processing. 2015
- An integrated golden spike information portal enabled by data visualization and semantic web technologies. Proceedings of IAMG. 2014
- Deep Carbon Virtual Observatory: A cyber-enabled platform for linked science. Proceedings of SciDataCon. 2014
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conference poster
- 2015 Enabling the Science Network of DCO - Status and directions. DCO International Science Meeting. 2015
- Beyond a Data Portal: A Collaborative Environment for the Deep Carbon Science Communities. DCO International Science Meeting. 2015
- Data types and persistent identifiers in the Deep Carbon Observatory Data Portal. RDA Fifth Plenary Meeting. 2015
- Database Integration: An Initial Step Towards the Deep-Time Data Infrastructure. AGU Fall Meeting. 2015
- Deep-Time Data Infrastructure: Integrating Our Current Geologic Databases. Annual Meeting of the Geological Society of America. 2015
- Determining Fitness-For-Use of Ontologies Through Change Management, Versioning and Publication Best Practices. AGU Fall Meeting. 2015
- Formal Specification of Data Types in the Deep Carbon Observatory Data Portal. DCO International Science Meeting. 2015
- Semantic Specification of Data Type Information in the Deep Carbon Observatory Data Portal. AGU Fall Meeting. 2015
- DCO-VIVO: A collaborative data platform for the Dean Carbon Science Communities. AGU Fall Meeting. 2014
- Deliberations of reusing the PROV Ontology for provenance capture in Earth and environmental sciences. ESIP Winter Meeting. 2014
- Ontology development for provenance tracing in National Climate Assessment of the US Global Change Research Program. EGU General Assembly. 2014
- Towards a common provenance model for research publications. AGU Fall Meeting. 2014
- User-aware multi-dimensional data exploration for Deep Carbon Observatory. EGU General Assembly. 2014
- Indexable computation as a service in Deep Carbon Observatory. AGU Fall Meeting. 2013
- Ontology engineering for provenance enablement in the third National Climate Assessment. ESIP Summer Meeting. 2013
- Semantic similarity computation and concept mapping in earth and environmental science. AGU Fall Meeting. 2013
- Semantically-enabled knowledge discovery in the Deep Carbon Observatory. AGU Fall Meeting. 2013
- Beyond an image: using ontology and visualization to enrich Web Map Service for geosciences. ESIP Summer Meeting. 2012
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editorial article
- Semantic eScience. Earth Science Informatics. 8:1-3. 2015
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report