Publications in VIVO

Co-author Network

Co-investigator Network

Barrie D Robison Professor and Director, IBEST

Positions

Member, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho
Professor, Biological Sciences , College of Science 2016 -
Director, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho 2018 -
Associate Director, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho 2015 - 2017
Associate Professor, Biological Sciences , College of Science 2010 - 2016

Publications

selected publications

abstract
- Genetic variation within the selenoproteome influences anxiety-related behaviors in zebrafish (Danio rerio). FASEB Journal. 2013
- The link between stress and behavior in zebrafish: is embryonic perturbation a factor?. Integrative and Comparative Biology. E191-E191. 2012
- Consequences of Maternal BPA on the primate fetal muscle transcriptome 2010
- Variation in gene expression among the brains of behaviorally distinct zebrafish strains. no evidence for parallel transcriptome evolution during domestication. Integrative and Comparative Biology. E120-E120. 2006
academic article
- Anxiolytic effects of fluoxetine and nicotine exposure on exploratory behavior in zebrafish. PeerJ. 4. 2016
- Characterization and Evolution of the Spotted Gar Retina. Journal of Experimental Zoology Part B - Molecular and Developmental Evolution. 326:403-421. 2016
- Full Mitochondrial Genome Sequence of the Sugar Beet Wireworm Limonius californicus (Coleoptera: Elateridae), a Common Agricultural Pest.. Genome Announcements. 4. 2016
- Oncorhynchus mykiss pax7 sequence variations with comparative analyses against other teleost species. Springerplus. 4. 2015
- Maternal Bisphenol A Exposure Impacts the Fetal Heart Transcriptome. PLOS ONE. 9. 2014
- Retinal regeneration is facilitated by the presence of surviving neurons. Developmental Neurobiology. 2014
- Sex-specific transcriptional responses of the zebrafish (Danio rerio) brain selenoproteome to acute sodium selenite supplementation. Physiological Genomics. 45:653-666. 2013
- The quantitative genetic architecture of the bold-shy continuum in zebrafish, Danio rerio. PLOS ONE. 2013
- Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio). BMC Genomics. 13:1-13. 2012
- An improved algorithm for the detection of genomic variation using short oligonucleotide expression microarrays. Molecular Ecology Resources. 12:1079-1089. 2012
- Is Behavioral Variation along the Bold-Shy Continuum Associated with Variation in the Stress Axis in Zebrafish?. Physiological and Biochemical Zoology. 85:718-728. 2012
- The genetic architecture of the bold-shy continuum in zebrafish, Danio rerio. Integrative and Comparative Biology. 52:E161-E161. 2012
- Effect of Aging on Male Reproduction in Zebrafish (Danio rerio). Journal of Experimental Zoology Part A-Ecological and Integrative Physiology. 315A:156-161. 2011
- Retinal proliferation response in the buphthalmic zebrafish, bugeye. Experimental Eye Research. 93. 2011
- Zebrafish (Danio rerio) vary by strain and sex in their behavioral and transcriptional responses to selenium supplementation. Comparative Biochemistry and Physiology. Part A, Molecular and Integrative Physiology. 157:310-318. 2010
- Dietary carbohydrate level affects transcription factor expression that regulates skeletal muscle myogenesis in rainbow trout. Comparative Biochemistry and Physiology. Part B, Biochemistry and Molecular Biology. 153:66-72. 2009
- Effect of starvation on transcriptomes of brain and liver in adult female zebrafish (Danio rerio). Physiological Genomics. 35:283-295. 2008
- Sexual dimorphism in hepatic gene expression and the response to dietary carbohydrate manipulation in the zebrafish (Danio rerio).. Comparative Biochemistry and Physiology. Part D, Genomics and Proteomics. 3:141-154. 2008
- Strain-specific alteration of zebrafish feeding behavior in response to aversive stimuli. Canadian Journal of Zoology. 86:1085-1094. 2008
- Effect of starvation on transcriptomes of brain and liver in adult female zebrafish ( Danio rerio ). Physiological Genomics. 35:283-295. 2008
- Behavioral syndromes and the evolution of correlated behavior in zebrafish. Behavioral Ecology. 18:556-562. 2007
- The effects of early and adult social environment on zebrafish (Danio rerio) behavior. Environmental Biology of Fishes. 80:91-101. 2007
- Variation in behavior and global patterns of gene expression among wild and domesticated zebrafish: Implications for teleost aquaculture. Aquaculture. 272:S305-S305. 2007
- Behavioral syndromes and adaptation to captivity in the zebrafish, Danio rerio. Integrative and Comparative Biology. 46:E105-E105. 2006
- Early developmental expression of two insulins in zebrafish (Danio rerio). Physiological Genomics. 27:79-85. 2006
- A potential model system for studying the genetics of domestication: behavioral variation among wild and domesticated strains of zebra danio (Danio rerio). Canadian Journal of Fisheries and Aquatic Sciences. 62:2046-2054. 2005
- The phenotypic relationship of a clonal line to its population of origin: Rapid embryonic development in an Alaskan population of rainbow trout. Transactions of the American Fisheries Society. 133:455-461. 2004
- Status and opportunities for genomics research with rainbow trout. Comparative Biochemistry and Physiology. Part B, Biochemistry and Molecular Biology. 133:609-646. 2002
chapter
- A High Throughput and Inexpensive Assay for Anxiety Related Behaviors in the Zebrafish Based on Place Preference and Latency to Feed. Zebrafish Protocols for Neurobehavioral Research. Ed. Kalueff, A V. Humana Press. 2012
- Prospects and Pitfalls of Clonal Fishes in the Postgenomic Era. Aquaculture Biotechnology. 2011
- The role of model organisms in aquaculture: transient and permanent advantages. Molecular approaches in aquaculture. 2009
- Possible approaches for genetic analysis of temperature adaptations in redband trout. Redband trout: resilience and challenge in a changing landscape. 19-24. 2007
- Genetic backgrounds, standard lines, and their husbandry. Methods in cell biology. 599-615. 2004
- Genetic analysis of complex traits using clonal rainbow trout lines. Aquatic Genomics: Steps Toward a Great Future. 395-398. 2003
dataset
- Limonius californicus mitochondrion, complete genome 2016
- Oncorhynchus mykiss paired box protein 7 alpha variant 4 (pax7) mRNA, complete cds, alternatively spliced 2015

Research

principal investigator on

Collaborative Research: UBM - Institutional: UI-WSU Program in Undergraduate Mathematics and Biology awarded by NSF Division of Mathematical Sciences (DMS) 2010 - 2015
Genetic Analysis of Behavioral Variation Among Wild and Domesticated Strains of Zebrafish. awarded by NSF Division of Integrative Organismal Systems (IOS) 2008 - 2013
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2011) awarded by National Center for Research Resources (NCRR) 2011 - 2012
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2010) awarded by National Center for Research Resources (NCRR) 2010 - 2011
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2009) awarded by National Center for Research Resources (NCRR) 2009 - 2010
DISSERTATION RESEARCH: Behavioral adaptation to captivity in the zebrafish, Danio rerio awarded by NSF Division of Integrative Organismal Systems (IOS) 2008 - 2009

Contact

full name

Barrie D Robison