Publications in VIVO

Co-author Network

Co-investigator Network

Barrie D Robison Professor and Director, IBEST

Positions

Member, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho
Professor, Biological Sciences , College of Science 2016 -
Director, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho 2018 -
Associate Director, Institute for Bioinformatics and Evolutionary Studies (IBEST) , University of Idaho 2015 - 2017
Associate Professor, Biological Sciences , College of Science 2010 - 2016

Publications

selected publications

abstract
- Genetic variation within the selenoproteome influences anxiety-related behaviors in zebrafish (Danio rerio). FASEB Journal. 2013
- The link between stress and behavior in zebrafish: is embryonic perturbation a factor?. Integrative and Comparative Biology. E191-E191. 2012
- Consequences of Maternal BPA on the primate fetal muscle transcriptome 2010
- Variation in gene expression among the brains of behaviorally distinct zebrafish strains. no evidence for parallel transcriptome evolution during domestication. Integrative and Comparative Biology. E120-E120. 2006
academic article
- Anxiolytic effects of fluoxetine and nicotine exposure on exploratory behavior in zebrafish. PeerJ. 4. 2016
- Characterization and Evolution of the Spotted Gar Retina. Journal of Experimental Zoology Part B - Molecular and Developmental Evolution. 326:403-421. 2016
- Full Mitochondrial Genome Sequence of the Sugar Beet Wireworm Limonius californicus (Coleoptera: Elateridae), a Common Agricultural Pest. Genome Announcements. 4. 2016
- Oncorhynchus mykiss pax7 sequence variations with comparative analyses against other teleost species. Springerplus. 4. 2015
- Maternal Bisphenol A Exposure Impacts the Fetal Heart Transcriptome. PLOS ONE. 9. 2014
- Retinal regeneration is facilitated by the presence of surviving neurons. Developmental Neurobiology. 74:851-876. 2014
- Sex-specific transcriptional responses of the zebrafish (Danio rerio) brain selenoproteome to acute sodium selenite supplementation. Physiological Genomics. 45:653-666. 2013
- The quantitative genetic architecture of the bold-shy continuum in zebrafish, Danio rerio. PLOS ONE. 2013
- Is Behavioral Variation along the Bold-Shy Continuum Associated with Variation in the Stress Axis in Zebrafish?. Physiological and Biochemical Zoology. 85:718-728. 2012
- Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio). BMC Genomics. 13:1-13. 2012
- An improved algorithm for the detection of genomic variation using short oligonucleotide expression microarrays. Molecular Ecology Resources. 12:1079-1089. 2012
- The genetic architecture of the bold-shy continuum in zebrafish, Danio rerio. Integrative and Comparative Biology. 52:E161-E161. 2012
- Effect of Aging on Male Reproduction in Zebrafish (Danio rerio). Journal of Experimental Zoology Part A-Ecological and Integrative Physiology. 315A:156-161. 2011
- Retinal proliferation response in the buphthalmic zebrafish, bugeye. Experimental Eye Research. 93. 2011
- Zebrafish (Danio rerio) vary by strain and sex in their behavioral and transcriptional responses to selenium supplementation. Comparative Biochemistry and Physiology. Part A, Molecular and Integrative Physiology. 157:310-318. 2010
- Dietary carbohydrate level affects transcription factor expression that regulates skeletal muscle myogenesis in rainbow trout. Comparative Biochemistry and Physiology. Part B, Biochemistry and Molecular Biology. 153:66-72. 2009
- Effect of starvation on transcriptomes of brain and liver in adult female zebrafish (Danio rerio). Physiological Genomics. 35:283-295. 2008
- Sexual dimorphism in hepatic gene expression and the response to dietary carbohydrate manipulation in the zebrafish (Danio rerio).. Comparative Biochemistry and Physiology. Part D, Genomics and Proteomics. 3:141-154. 2008
- Strain-specific alteration of zebrafish feeding behavior in response to aversive stimuli. Canadian Journal of Zoology. 86:1085-1094. 2008
- Effect of starvation on transcriptomes of brain and liver in adult female zebrafish ( Danio rerio ). Physiological Genomics. 35:283-295. 2008
- The effects of early and adult social environment on zebrafish (Danio rerio) behavior. Environmental Biology of Fishes. 80:91-101. 2007
- Behavioral syndromes and the evolution of correlated behavior in zebrafish. Behavioral Ecology. 18:556-562. 2007
- Variation in behavior and global patterns of gene expression among wild and domesticated zebrafish: Implications for teleost aquaculture. Aquaculture. 272:S305-S305. 2007
- Behavioral syndromes and adaptation to captivity in the zebrafish, Danio rerio. Integrative and Comparative Biology. 46:E105-E105. 2006
- Early developmental expression of two insulins in zebrafish (Danio rerio). Physiological Genomics. 27:79-85. 2006
- A potential model system for studying the genetics of domestication: behavioral variation among wild and domesticated strains of zebra danio (Danio rerio). Canadian Journal of Fisheries and Aquatic Sciences. 62:2046-2054. 2005
- The phenotypic relationship of a clonal line to its population of origin: Rapid embryonic development in an Alaskan population of rainbow trout. Transactions of the American Fisheries Society. 133:455-461. 2004
- Status and opportunities for genomics research with rainbow trout. Comparative Biochemistry and Physiology. Part B, Biochemistry and Molecular Biology. 133:609-646. 2002
chapter
- A High Throughput and Inexpensive Assay for Anxiety Related Behaviors in the Zebrafish Based on Place Preference and Latency to Feed. Zebrafish Protocols for Neurobehavioral Research. Ed. Kalueff, Allan V. Humana Press. 2012
- Prospects and Pitfalls of Clonal Fishes in the Postgenomic Era. Aquaculture Biotechnology. 2011
- The role of model organisms in aquaculture: transient and permanent advantages. Molecular approaches in aquaculture. 2009
- Possible approaches for genetic analysis of temperature adaptations in redband trout. Redband trout: resilience and challenge in a changing landscape. 19-24. 2007
- Genetic backgrounds, standard lines, and their husbandry. Methods in Cell Biology. 599-615. 2004
- Genetic analysis of complex traits using clonal rainbow trout lines. Aquatic Genomics: Steps Toward a Great Future. 395-398. 2003
dataset
- Limonius californicus mitochondrion, complete genome 2016
- Oncorhynchus mykiss paired box protein 7 alpha variant 4 (pax7) mRNA, complete cds, alternatively spliced 2015

Research

principal investigator on

Collaborative Research: UBM - Institutional: UI-WSU Program in Undergraduate Mathematics and Biology awarded by NSF Division of Mathematical Sciences (DMS) 2010 - 2015
Genetic Analysis of Behavioral Variation Among Wild and Domesticated Strains of Zebrafish. awarded by NSF Division of Integrative Organismal Systems (IOS) 2008 - 2013
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2011) awarded by National Center for Research Resources (NCRR) 2011 - 2012
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2010) awarded by National Center for Research Resources (NCRR) 2010 - 2011
COBRE: UID: Pilot: Selenium Homeostasis and Anxiety: the Role of the Genotype (FY 2009) awarded by National Center for Research Resources (NCRR) 2009 - 2010
DISSERTATION RESEARCH: Behavioral adaptation to captivity in the zebrafish, Danio rerio awarded by NSF Division of Integrative Organismal Systems (IOS) 2008 - 2009

Contact

full name

Barrie D Robison