selected publications
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academic article
- A New Mouse SNP Genotyping Assay for Speed Congenics: Combining Flexibility, Affordability, and Power. BMC Genomics. 22:378. 2021
- Biosolids as a Source of Antibiotic Resistance Plasmids for Commensal and Pathogenic Bacteria. Frontiers in Microbiology. 12:606409. 2021
- The Species-Specific Acquisition and Diversification of a K1-like Family of Killer Toxins in Budding Yeasts of the Saccharomycotina. PLOS Genetics. 17:e1009341. 2021
- Diversification, Introgression, and Rampant Cytonuclear Discordance in Rocky Mountains Chipmunks (Sciuridae: Tamias). Systematic Biology. 2021
- Wireworm (Coleoptera: Elateridae) Genomic Analysis Reveals Putative Cryptic Species, Population Structure, and Adaptation to Pest Control. Communications Biology. 3:489. 2020
- Priority effects of wheat seed endophytes on a rhizosphere symbiosis. Symbiosis. 78:19-31. 2019
- A Rapid Method for Sequencing Double-Stranded RNAs Purified from Yeasts and the Identification of a Potent K1 Killer Toxin Isolated from Saccharomyces cerevisiae. Viruses-Basel. 11:70. 2019
- Regeneration associated transcriptional signature of retinal microglia and macrophages. Scientific Reports. 9:4768. 2019
- Silencing efficiency of dsRNA fragments targeting Fusarium graminearum TRI6 and patterns of small interfering RNA associated with reduced virulence and mycotoxin production. PLOS One. 13:e0202798. 2018
- Complete Genome Sequence of Broad-Host-Range Shiga Toxin-Converting Bacteriophage SH2026Stx1, Isolated from Escherichia coli O157:H7. Genome Announcements. 6:UNSP e00490-18. 2018
- Complete Mitochondrial Genome Sequence of Bighorn Sheep. Genome Announcements. 6:UNSP e00464-18. 2018
- High-Quality Complete Genome Sequences of Three Bovine Shiga Toxin-Producing Escherichia coli O177:H- (fliC(H25)) Isolates Harboring Virulent stx2 and Multiple Plasmids. Microbiology Resource Announcements. 6:UNSP e01592-17. 2018
- Comparative Phylogenomic Assessment of Mitochondrial Introgression among Several Species of Chipmunks (Tamias). Genome Biology and Evolution. 9:7-19. 2017
- Evolutionary Paths That Expand Plasmid Host-Range: Implications for Spread of Antibiotic Resistance. Molecular Biology and Evolution. 33:885-897. 2016
- Mitochondrial Genome Sequence of the Galapagos Endemic Land Snail Naesiotus nux. Genome Announcements. 4. 2016
- The population genomics of rapid adaptation: disentangling signatures of selection and demography in white sands lizards. Molecular Ecology. 25:306-323. 2016
- Retinoic Acid Signaling Regulates Differential Expression of the Tandemly-Duplicated Long Wavelength-Sensitive Cone Opsin Genes in Zebrafish. PLOS Genetics. 11. 2015
- A Sex-Determining Gene (sdY) Assay Shows Discordance between Phenotypic and Genotypic Sex in Wild Populations of Chinook Salmon. Transactions of the American Fisheries Society. 144:423-430. 2015
- Phase Variation in Myxococcus xanthus Yields Cells Specialized for Iron Sequestration. PLOS One. 9:e95189. 2014
- Retinal regeneration is facilitated by the presence of surviving neurons. Developmental Neurobiology. 74:851-876. 2014
- Draft Genome Sequence of Pseudomonas moraviensis R28-S. Genome Announcements. 2. 2014
- Comparative genome analysis of an avirulent and two virulent strains of avian Pasteurella multocida reveals candidate genes involved in fitness and pathogenicity. BMC Microbiology. 13. 2013
- Draft Genome Sequences of Two Virulent Serotypes of Avian Pasteurella multocida. Genome Announcements. 2013
- SlopMap: a software application tool for quick and flexible identification of similar sequences using exact k-mer matching. Journal of Data Mining in Genomics and Proteomics. 4:1-6. 2013
- Retinal proliferation response in the buphthalmic zebrafish, bugeye. Experimental Eye Research. 93. 2011
- Non-Sex Specific Genes Associated With the Secondary Mitotic Period of Primordial Germ Cell Proliferation in the Gonads of Embryonic Rainbow Trout (Oncorhynchus mykiss). Molecular Reproduction and Development. 78:181-187. 2011
- Identification of Novel Genes Associated with Molecular Sex Differentiation in the Embryonic Gonads of Rainbow Trout (Oncorhynchus mykiss). Sexual Development. 3:214-224. 2009
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