selected publications
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academic article
- Influence of environmental conditions at spawning sites and migration routes on adaptive variation and population connectivity in Chinook salmon. Ecology and Evolution. 11:16890-16908. 2021
- Biodiversity Monitoring Using Environmental DNA. Molecular Ecology Resources. 21:1405-1409. 2021
- The Changing Face of Genome Assemblies: Guidance on Achieving High-quality Reference Genomes. Molecular Ecology Resources. 21:641-652. 2021
- Sharing and Reporting Benefits from Biodiversity Research. Molecular Ecology. 30:1103-1107. 2021
- Dietary tetradecylthioacetic acid supplementation during the fall prevents an increase in body lipid levels but does not influence precocious male maturation rate in juvenile spring Chinook salmon. Aquaculture Research. 2021
- Genomic Islands of Divergence Infer a Phenotypic Landscape in Pacific Lamprey. Molecular Ecology. 2020
- Evaluation of a Trap-and-transport Program for a Threatened Population of Steelhead (Oncorhynchus mykiss). Conservation Genetics. 1-5. 2019
- Aquatic Lanscape Genomics and Environmental Effects on Genetic Variation. Trends in Ecology and Evolution. 34:641-654. 2019
- Editorial 2019. Molecular Ecology Resources. 19:01-18. 2019
- Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon. Proceedings of the Royal Society B: Biological Sciences. 285. 2018
- Physiological and genomic signatures of evolutionary thermal adaptation in redband trout from extreme climates. Evolutionary Applications. 11:1686-1699. 2018
- Plasma 11-Ketotestosterone in Individual Age-1 Spring Chinook Salmon Males Accurately Predicts Age-2 Maturation Status. Transactions of the American Fisheries Society. 147:1042-1051. 2018
- Sea-to-sea survival of late-run adult steelhead ( Oncorhynchus mykiss ) from the Columbia and Snake rivers. Canadian Journal of Fisheries and Aquatic Sciences. 75:331-341. 2018
- Vive la resistance: genome-wide selection against introduced alleles in invasive hybrid zones. Proceedings of the Royal Society B: Biological Sciences. 183. 2016
- Genomics in conservation: Case studies and bridging the gap between data and application. Trends in Ecology and Evolution. 31:81-83. 2016
- Environmental adaptation in Chinook salmon (Oncorhynchus tshawytscha) throughout their North American range. Molecular Ecology. 24:5573-5595. 2015
- Genotyping-in-Thousands by sequencing (GT-seq): A cost effective SNP genotyping method based on custom amplicon sequencing. Molecular Ecology Resources. 15:855-867. 2015
- Differential expression of genes that control respiration contribute to thermal adaptation in redband trout (Oncorhynchus mykiss gairdneri). Genome Biology and Evolution. 7:1404-1414. 2015
- Population differentiation determined from putative neutral and divergent adaptive genetic markers in Eulachon (Thaleichthys pacificus, Osmeridae), an anadromous Pacific smelt. Molecular Ecology Resources. 15:1421-1434. 2015
- Selection for upper thermal tolerance in rainbow trout. Journal of Experimental Biology. 218:803-881. 2015
- Genes predict long distance migration and large body size in a migratory fish, Pacific lamprey. Evolutionary Applications. 7:1192-1208. 2014
- Genotyping-by-sequencing in ecological and conservation genomics. Molecular Ecology. 22:2841-2847. 2013
- Thermal adaptation and acclimation of ectotherms from differing aquatic climates. Molecular Ecology. 22:3090-3097. 2013
- A review of genetic evaluation tools for conservation and management of North American sturgeons: roles, benefits, and limitations. Journal of Applied Ichthyology. 27:3-11. 2011
- Iteroparity in complex mating systems of steelhead Oncorhynchus mykiss (Walbaum). Journal of Fish Biology. 72:45-60. 2008
- Reproductive isolation following reintroduction of Chinook salmon with alternative life histories. Conservation Genetics. 8:1123-1132. 2007
- Microsatellites reveal population substructure of Klickitat River native steelhead and genetic divergence from an introduced stock. North American Journal of Fisheries Management. 26:147-155. 2006
- Small-scale genetic structure and variation in steelhead of the Grande Ronde River, Oregon, USA. Transactions of the American Fisheries Society. 135:979-986. 2006
- Genetic divergence of sympatric resident and anadromous forms of Oncorhynchus mykiss in the Walla Walla River, U.S.A.. Journal of Fish Biology. 65:471-488. 2004
- A distinctive microsatellite locus that differentiates ocean-type from stream-type Chinook salmon in the interior Columbia River basin. Transactions of the American Fisheries Society. 133:1051-1055. 2004