selected publications
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academic article
- Calculation of Protein-Protein Binding Free Energies using Umbrella Sampling with Dual Resolution Water Models. Biophysical Journal. 116:291A-291A. 2019
- Vision using multiple distinct rod opsins in deep-sea fishes. Science. 364:588. 2019
- Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations. Investigative Ophthalmology and Visual Science. 14:blank. 2018
- Fast Calculation of Protein–Protein Binding Free Energies Using Umbrella Sampling with a Coarse-Grained Model. Journal of Chemical Theory and Computation. 14:991-997. 2018
- Predicting Spectral Shift in the Teleost Rh2 Cone Opsins using Molecular Dynamics Simulations. Biophysical Journal. 114:338A-338A. 2018
- Adaptive Mutations in RNA Polymerase and the Transcriptional Terminator Rho Have Similar Effects on Escherichia coli Gene Expression.. Molecular Biology and Evolution. 34:2839-2855. 2017